P-Aminobenzoyl-glutamate transporter

Identifiers
Symbol AbgT
Pfam PF03806
TCDB 2.A.68
OPM superfamily 465
OPM protein 4r1i

The p-aminobenzoyl-glutamate transporter (AbgT) family (TC# 2.A.68) is a family of transporter proteins belonging to the ion transporter (IT) superfamily.[1][2] The AbgT family consists of the AbgT (YdaH; TC# 2.A.68.1.1) protein of E. coli and the MtrF drug exporter (TC# 2.A.68.1.2) of Neisseria gonorrhoeae.[3][4] The former protein is apparently cryptic in wild-type cells, but when expressed on a high copy number plasmid, or when expressed at higher levels due to mutation, it appeared to allow uptake (Km = 123 nM; see Michaelis–Menten kinetics) and subsequent utilization of p-aminobenzoyl-glutamate as a source of p-aminobenzoate for p-aminobenzoate auxotrophs.[5] p-Aminobenzoate is a constituent of and a precursor for the biosynthesis of folic acid. MtrF was annotated as a putative drug efflux pump.[4]

Structure

AbgT is 510 amino acyl residues long and has 12-13 putative transmembrane α-helical spanners (TMSs). MtrF is 522 aas long and has 11 or 12 putative TMSs. The 3-d structures of MtrF and a YdaH homologue have been solved, and functional studies show that it is a drug exporter. The 3-d structure shows that it has 9 TMSs with hairpin entry loops.[6]

Crystal Structures:

Genetics

The abgT gene is preceded by two genes, abgA and abgB, which code for homologous amino acyl amino hydrolases and hydrolyze p-aminobenzoyl glutamate to p-aminobenzoate and glutamate.[5] Because of the structural similarity of p-aminobenzoyl-glutatmate to peptides, and the enzymatic activities of the abgA and abgB gene products, it has been suggested that AbgT is also a peptide transporter.[5] Demonstration of an energy requirement suggested an H+-dependent mechanism.[5] Expression of these genes is regulated by AbgR and an unknown effector.

Function

As noted above, the AbgT family of transporters has been thought to contribute to bacterial folate biosynthesis by importing the catabolite p-aminobenzoyl-glutamate for producing folate. Approximately 13,000 putative family members were identified in 2015.[7] The X-ray structures of the full-length Alcanivorax borkumensis YdaH (AbgT) and Neisseria gonorrhoeae MtrF proteins. The structures revealed that these two transporters assemble as dimers with architectures distinct from all other families of transporters for which 3-d structures were available. Both YdaH and MtrF are bowl-shaped dimers with a solvent-filled basin extending from the cytoplasm halfway across the membrane bilayer. The protomers of YdaH and MtrF contain nine transmembrane helices and two hairpins which suggested a plausible pathway for substrate transport.[7] A combination of the crystal structure, genetic analyses and substrate accumulation assays indicated that both YdaH and MtrF behave as exporters, capable of removing the folate metabolite p-aminobenzoic acid from bacterial cells. In fact, it was shown that both YdaH and MtrF participate as antibiotic efflux pumps, mediating bacterial resistance to sulfonamide antimetabolite drugs. Possibly, many AbgT-family transporters act as exporters, conferring resistance to sulfonamides.[7]

Transport Reaction

The generalized transport reaction initially proposed for AbgT is:

p-aminobenzoyl-glutamate (out) + nH+ (out) → p-aminobenzoyl-glutamate (in) + nH+ (in)

but the more recently proposed transport reaction is:

Sulfonamide drugs (in) + H+ (out) → Sulfonamide drugs (out) + H+ (in)

See also

References

  1. ↑ Prakash, Shraddha; Cooper, Garret; Singhi, Soumya; Saier, Milton H. (2003-12-03). "The ion transporter superfamily". Biochimica et Biophysica Acta. 1618 (1): 79–92. doi:10.1016/j.bbamem.2003.10.010. ISSN 0006-3002. PMID 14643936.
  2. ↑ Rabus, R.; Jack, D. L.; Kelly, D. J.; Saier, M. H. (1999-12-01). "TRAP transporters: an ancient family of extracytoplasmic solute-receptor-dependent secondary active transporters". Microbiology (Reading, England). 145 ( Pt 12): 3431–3445. doi:10.1099/00221287-145-12-3431. ISSN 1350-0872. PMID 10627041.
  3. ↑ Hussein, M. J.; Green, J. M.; Nichols, B. P. (1998-12-01). "Characterization of mutations that allow p-aminobenzoyl-glutamate utilization by Escherichia coli". Journal of Bacteriology. 180 (23): 6260–6268. ISSN 0021-9193. PMC 107711Freely accessible. PMID 9829935.
  4. 1 2 Folster, Jason P.; Shafer, William M. (2005-06-01). "Regulation of mtrF expression in Neisseria gonorrhoeae and its role in high-level antimicrobial resistance". Journal of Bacteriology. 187 (11): 3713–3720. doi:10.1128/JB.187.11.3713-3720.2005. ISSN 0021-9193. PMC 1112036Freely accessible. PMID 15901695.
  5. 1 2 3 4 Carter, Eric L.; Jager, Lindsey; Gardner, Lars; Hall, Christel C.; Willis, Stacey; Green, Jacalyn M. (2007-05-01). "Escherichia coli abg genes enable uptake and cleavage of the folate catabolite p-aminobenzoyl-glutamate". Journal of Bacteriology. 189 (9): 3329–3334. doi:10.1128/JB.01940-06. ISSN 0021-9193. PMC 1855889Freely accessible. PMID 17307853.
  6. ↑ Su, Chih-Chia; Bolla, Jani Reddy; Kumar, Nitin; Radhakrishnan, Abhijith; Long, Feng; Delmar, Jared A.; Chou, Tsung-Han; Rajashankar, Kanagalaghatta R.; Shafer, William M. (2015-04-07). "Structure and function of Neisseria gonorrhoeae MtrF illuminates a class of antimetabolite efflux pumps". Cell Reports. 11 (1): 61–70. doi:10.1016/j.celrep.2015.03.003. ISSN 2211-1247. PMC 4410016Freely accessible. PMID 25818299.
  7. 1 2 3 Delmar, Jared A.; Yu, Edward W. (2016-02-01). "The AbgT family: A novel class of antimetabolite transporters". Protein Science: A Publication of the Protein Society. 25 (2): 322–337. doi:10.1002/pro.2820. ISSN 1469-896X. PMID 26443496.
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