Enzyme |
PDB code |
Source |
Recognition sequence |
Cut |
Isoschizomers |
BdiI |
|
Brevibacterium divaricatum |
5' ATCGAT 3' TAGCTA |
5' ---AT CGAT--- 3' 3' ---TAGC TA--- 5' |
BavCI, Bci29I, Bli41I, Bli86I, BseCI, BsuTUI, Rme21I, SpmI |
BdiSI |
|
Bacteroides distasonis |
5' CTRYAG 3' GAYRTC |
5' ---C TRYAG--- 3' 3' ---GAYRT C--- 5' |
|
BecAII |
|
Brevibacterium sp. A |
5' GGCC 3' CCGG |
5' ---GG CC--- 3' 3' ---CC GG--- 5' |
|
BepI |
|
Brevibacterium epidermidis |
5' CGCG 3' GCGC |
5' ---CG CG--- 3' 3' ---GC GC--- 5' |
AccII, BepI, BspFNI, BstUI, Bsu1532I, BtkI, FalII, FauBII, ThaI |
BetI |
|
Brevibacterium acetyliticum |
5' WCCGGW 3' WGGCCW |
5' ---W CCGGW--- 3' 3' ---WGGCC W--- 5' |
|
BfaI [7] |
|
Bacteroides fragilis |
5' CTAG 3' GATC |
5' ---C TAG--- 3' 3' ---GAT C--- 5' |
|
BfiI |
2C1L |
Bacillus firmus S8120 |
5' ACTGGG 3' TGACCC |
5' ---ACTGGGNNNNN --- 3' 3' ---TGACCCNNNN N--- 5' |
BmrI |
Bfi57I |
|
Butyrivibrio fibrisolvens OB157 |
5' GATC 3' CTAG |
5' --- GATC--- 3' 3' ---CTAG --- 5' |
Bsp105I, Bsp143I, BspJI, BstMBI, CviAI, Kzo9I, NdeII, SsiBI |
Bfi89I |
|
Butyrivibrio fibrisolvens OB189 |
5' YGGCCR 3' RCCGGY |
5' ---Y GGCCR--- 3' 3' ---RCCGG Y--- 5' |
|
BflI |
|
Bacillus flavothermus |
5' CCN7GG 3' GGN7CC |
5' ---CCNNNNN NNGG--- 3' 3' ---GGNN NNNNNCC--- 5' |
|
BfmI |
|
Bacillus firmus S8-336 |
5' CTRYAG 3' GAYRTC |
5' ---C TRYAG--- 3' 3' ---GAYRT C--- 5' |
|
BfrI |
|
Bacteroides fragilis |
5' CTTAAG 3' GAATTC |
5' ---C TTAAG--- 3' 3' ---GAATT C--- 5' |
|
BfrBI [8] |
|
Bacteroides fragilis BE3 |
5' ATGCAT 3' TACGTA |
5' ---ATGCA T--- 3' 3' ---T ACGTA--- 5' |
Csp68KIII, EcoT22I, Mph1103I, PinBI, Ppu10I, SepI, SspD5II, Zsp2I |
BfuI |
|
Bacillus firmus Auk 22-m21 |
5' GTATCC 3' CATAGG |
5' ---GTATCCN4NN --- 3' 3' ---CATAGGN4N N--- 5' |
BciVI |
BfuAI |
|
Bacillus fusiformis |
5' ACCTGC 3' TGGACG |
5' ---ACCTGCNNNN NNNN--- 3' 3' ---TGGACGNNNNNNNN --- 5' |
Acc36I, BspMI, BveI |
BfuCI |
|
Bacillus fusiformis 1226 |
5' GATC 3' CTAG |
5' --- GATC--- 3' 3' ---CTAG --- 5' |
Bce243I, Bsp105I, BspFI, BstKTI, CpfI, HacI, MkrAI, Sth368I |
BglI |
1DMU |
Bacillus globigii |
5' GCCN5GGC 3' CGGN5CCG |
5' ---GCCNNNN NGGC--- 3' 3' ---CGGN NNNNCCG--- 5' |
|
BglII |
1ES8 |
Bacillus globigii |
5' AGATCT 3' TCTAGA |
5' ---A GATCT--- 3' 3' ---TCTAG A--- 5' |
|
BimI |
|
Brevibacterium immotum |
5' TTCGAA 3' AAGCTT |
5' ---TT CGAA--- 3' 3' ---AAGC TT--- 5' |
AcpI, AsuII, Bpu14I, BspT104I, CbiI, FspII, MlaI, PpaAI, SfuI |
Bim19I |
|
Brevibacterium immotum 19 |
5' TTCGAA 3' AAGCTT |
5' ---TT CGAA--- 3' 3' ---AAGC TT--- 5' |
AcpI, AsuII, Bpu14I, BspT104I, CbiI, FspII, MlaI, PpaAI, SfuI |
Bim19II |
|
Brevibacterium immotum 19 |
5' GGCC 3' CCGG |
5' ---GG CC--- 3' 3' ---CC GG--- 5' |
|
BinI |
|
Bifidobacterium infantis 659 |
5' GGATC 3' CCTAG |
5' ---GGATCNNNN N--- 3' 3' ---CCTAGNNNNN --- 5' |
AclWI, AlwI, |
BsrWI, |
BspPI, |
|
BlfI |
|
Bacillus licheniformis |
5' TCCGGA 3' AGGCCT |
5' ---T CCGGA--- 3' 3' ---AGGCC T--- 5' |
AccIII, Aor13HI, BseAI, BsiMI, BspMII, Bsu23I, Kpn2I, PinBII |
Bli41I |
|
Bacillus licheniformis 41 |
5' ATCGAT 3' TAGCTA |
5' ---AT CGAT--- 3' 3' ---TAGC TA--- 5' |
Bci29I, Bli86I, BseCI, BsiXI, BsuTUI, Rme21I, SpmI, Ssp27144I |
Bli86I |
|
Bacillus licheniformis 86 |
5' ATCGAT 3' TAGCTA |
5' ---AT CGAT--- 3' 3' ---TAGC TA--- 5' |
BliAI, Bli41I, BseDI, BsiXI, Rme21I, SpmI, Ssp27144I, ZhoI |
Bli736I |
|
Bacillus licheniformis 736 |
5' GGTCTC 3' CCAGAG |
5' ---GGTCTCN NNNN--- 3' 3' ---CCAGAGNNNNN --- 5' |
|
BliAI |
|
Bacillus licheniformis |
5' ATCGAT 3' TAGCTA |
5' ---AT CGAT--- 3' 3' ---TAGC TA--- 5' |
BliRI, Bli41I, BsiXI, BspDI, Rme21I, SpmI, Ssp27144I, ZhoI |
BliHKI |
|
Bacillus licheniformis HK |
5' CCTNAGG 3' GGANTCC |
5' ---CC TNAGG--- 3' 3' ---GGANT CC--- 5' |
AocI, AxyI, Bse21I, Bsu36I, Eco81I, MstII, SauI, SshAI |
BliRI |
|
Bacillus licheniformis |
5' ATCGAT 3' TAGCTA |
5' ---AT CGAT--- 3' 3' ---TAGC TA--- 5' |
BciBI, BdiI, Bli41I, BsiXI, BspDI, BspXI, LplI, SpmI, ZhoI |
BlnI |
|
Brevibacterium linens |
5' CCTAGG 3' GGATCC |
5' ---C CTAGG--- 3' 3' ---GGATC C--- 5' |
AspA2I, AvrII, AvrBII, BspA2I, XmaJI |
BloHI |
|
Bifidobacterium longum E194b |
5' RGATCY 3' YCTAGR |
5' ---R GATCY--- 3' 3' ---YCTAG R--- 5' |
|
BloHII |
|
Bifidobacterium longum E194b |
5' CTGCAG 3' GACGTC |
5' ---CTGCA G--- 3' 3' ---G ACGTC--- 5' |
AjoI, Asp713I, BsuBI, CflI, CfuII, HalII, PstI, SalPI, SflI, Sst12I |
BlpI |
|
Bacillus lentus |
5' GCTNAGC 3' CGANTCG |
5' ---GC TNAGC--- 3' 3' ---CGANT CG--- 5' |
|
BluI |
|
Brevibacterium luteum |
5' CTCGAG 3' GAGCTC |
5' ---C TCGAG--- 3' 3' ---GAGCT C--- 5' |
AbrI, BssHI, BstVI, PanI, Sau3239I, Sfr274I, TliI, XhoI |
Bme12I |
|
Bacillus megaterium 12 |
5' GATC 3' CTAG |
5' --- GATC--- 3' 3' ---CTAG --- 5' |
Bfi57I, Bsp143I, BspJI, BstMBI, CviAI, Kzo9I, NlaII, SsiBI |
Bme18I |
|
Bacillus megaterium 18 |
5' GGWCC 3' CCWGG |
5' ---G GWCC--- 3' 3' ---CCWG G--- 5' |
BamNxI, BcuAI, Csp68KI, EagMI, FssI, HgiCII, HgiJI, SinI |
Bme142I |
|
Bacillus megaterium 142 |
5' RGCGCY 3' YCGCGR |
5' ---RGC GCY--- 3' 3' ---YCG CGR--- 5' |
AccB2I, |
BfoI, |
Bsp143II, |
BstH2I, HaeII, LpnI |
|
Bme216I |
|
Bacillus megaterium 216 |
5' GGWCC 3' CCWGG |
5' ---G GWCC--- 3' 3' ---CCWG G--- 5' |
BamNxI, BcuAI, Csp68KI, Eco47I, FssI, HgiCII, HgiJI, SinI |
Bme361I |
|
Bacillus megaterium 361 |
5' GGCC 3' CCGG |
5' ---GG CC--- 3' 3' ---CC GG--- 5' |
|
Bme585I |
|
Bacillus mesentericus 585 |
5' CCCGC 3' GGGCG |
5' ---CCCGCNNNN NN--- 3' 3' ---GGGCGNNNNNN --- 5' |
|
Bme1390I |
|
Bacillus megaterium RFL1390 |
5' CCNGG 3' GGNCC |
5' ---CC NGG--- 3' 3' ---GGN CC--- 5' |
|
Bme1580I |
|
Bacillus megaterium 1580 |
5' GKGCMC 3' CMCGKG |
5' ---GKGCM C--- 3' 3' ---C MCGKG--- 5' |
|
BmgBI |
|
Bacillus megaterium |
5' CACGTC 3' GTGCAG |
5' ---CAC GTC--- 3' 3' ---GTG CAG--- 5' |
|
BmrI [9][10] |
|
Bacillus megaterium |
5' ACTGGG 3' TGACCC |
5' ---ACTGGGNNNNN --- 3' 3' ---TGACCCNNNN N--- 5' |
BfiI |
BmtI |
|
Bacillus megaterium S2 |
5' GCTAGC 3' CGATCG |
5' ---GCTAG C--- 3' 3' ---C GATCG--- 5' |
AceII, AsuNHI, |
BspOI, |
NheI, |
LlaG2I, PstNHI |
|
BmyI [11] |
|
Bacillus mycoides |
5' GDGCHC 3' CHCGDG |
5' ---GDGCH C--- 3' 3' ---C HCGDG--- 5' |
AocII, BsoCI, Bsp1286I, BspLS2I, MhlI, NspII, SduI |
BnaI |
|
Bacillus natto B3364 |
5' GGATCC 3' CCTAGG |
5' ---G GATCC--- 3' 3' ---CCTAG G--- 5' |
AccEBI, BamHI, Bce751I, BstI, CelI, OkrAI, Nsp29132II, Pfl8I, SolI |
BoxI |
|
Brevibacterium oxydans Iti 12-025 |
5' GACN4GTC 3' CTGN4CAG |
5' ---GACNN NNGTC--- 3' 3' ---CTGNN NNCAG--- 5' |
|
BpcI |
|
Bacillus sphaericus |
5' CTRYAG 3' GAYRTC |
5' ---C TRYAG--- 3' 3' ---GAYRT C--- 5' |
|
BpiI |
|
Bacillus pumilus sw 4-3 |
5' GAAGAC 3' CTTCTG |
5' ---GAAGACNN NNNN--- 3' 3' ---CTTCTGNNNNNN --- 5' |
|
BplI |
|
Bacillus pumilus |
5' GAGN5CTC 3' CTCN5GAG |
5' ---GAGN5CTCN7NNNNNN --- 3' 3' ---CTCN5GAGN7N NNNNN--- 5' |
|
BpmI |
|
Bacillus pumilus |
5' CTGGAG 3' GACCTC |
5' ---CTGGAGN13NNN --- 3' 3' ---GACCTCN13N NN--- 5' |
|
BpoAI |
|
Bacillus polymyxa |
5' ATTAAT 3' TAATTA |
5' ---AT TAAT--- 3' 3' ---TAAT TA--- 5' |
AseI, AsnI, PshBI, Sru4DI, VspI |
BptI |
|
Bacillus pantothenticus |
5' CCWGG 3' GGWCC |
5' ---CC WGG--- 3' 3' ---GGW CC--- 5' |
AjnI, BseBI, Bse16I, BstNI, BstOI, BstM6I, Bst2UI, EcoRII, MvaI |
BpuI |
|
Bacillus pumilus AHU1387A |
5' GRGCYC 3' CYCGRG |
5' ---GRGCY C--- 3' 3' ---C YCGRG--- 5' |
|
Bpu10I |
|
Bacillus pumilus 10 |
5' CCTNAGC 3' GGANTCG |
5' ---CC TNAGC--- 3' 3' ---GGANT CG--- 5' |
|
Bpu14I |
|
Bacillus pumilus 14 |
5' TTCGAA 3' AAGCTT |
5' ---TT CGAA--- 3' 3' ---AAGC TT--- 5' |
AcpI, AsuII, BsiCI, BspT104I, CbiI, FspII, MlaI, PpaAI, SfuI |
Bpu95I |
|
Bacillus pumilus 95 |
5' CGCG 3' GCGC |
5' ---CG CG--- 3' 3' ---GC GC--- 5' |
AccII, BepI, BspFNI, BstUI, Bsu1532I, FalII, FnuDII, MvnI, ThaI |
Bpu1102I |
|
Bacillus pumilus RFL1102 |
5' GCTNAGC 3' CGANTCG |
5' ---GC TNAGC--- 3' 3' ---CGANT CG--- 5' |
|
BpuAI [12] |
|
Bacillus pumilus |
5' GAAGAC 3' CTTCTG |
5' ---GAAGACNN NNNN--- 3' 3' ---CTTCTGNNNNNN --- 5' |
|
BpuAmI |
|
Bacillus pumilus |
5' GAGCTC 3' CTCGAG |
5' ---GAG CTC--- 3' 3' ---CTC GAG--- 5' |
|
BpuB5I |
|
Bacillus pumilus |
5' CGTACG 3' GCATGC |
5' ---C GTACG--- 3' 3' ---GCATG C--- 5' |
|
BpuDI |
|
Bacillus pumilus 1117 |
5' CCTNAGC 3' GGANTCG |
5' ---CC TNAGC--- 3' 3' ---GGANT CG--- 5' |
|
BpuEI |
|
Bacillus pumilus 2187a |
5' CTTGAG 3' GAACTC |
5' ---CTTGAGN13NNN --- 3' 3' ---GAACTCN13N NN--- 5' |
|
BpuJI [13][14] |
2VLA |
Bacillus pumilus RFL1458 |
5' CCCGT 3' GGGCA |
5' ---CCCGTN10N NNNNNNNN--- 3' 3' ---GGGCAN10NNNNNNNNN --- 5' |
— None on May 2010 — |
BpuSI |
|
Bacillus pumilus |
5' GGGAC 3' CCCTG |
5' ---GGGACN9N NNNN--- 3' 3' ---CCCTGN9NNNNN --- 5' |
|